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37 followers · 2 following · 12

Highlights

  • Arctic Code Vault Contributor

Organizations

@igraph @northstaratlas

Pinned

  1. singlet

    Single cell RNA Seq data analysis with quantitative phenotypes

    Python 9 4

  2. organic-box-factory

    Docker/Singularity containers for high-throughput sequencing pipelines in the cloud and on the ground

    Shell 1 2

  3. lshknn

    k nearest neighbor (KNN) graphs via Pearson correlation distance and local sensitive hashing (LSH).

    Python 11 1

  4. htseq/htseq

    Forked from simon-anders/htseq

    HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.

    Python 22 9

  5. seqanpy

    Fast pairwise sequence alignment using SeqAn, in Python.

    C++ 12 7

  6. hivwholeweb

    Web application for deep sequencing on longitudinal HIV-1 samples from patients.

    JavaScript 3 4

483 contributions in the last year

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Contribution activity

February 2021

Created 7 commits in 3 repositories
Created 1 repository

Created a pull request in igraph/python-igraph that received 4 comments

Add harmonic centrality

As in #362

+142 −1 • 4 comments
Opened 1 other pull request in 1 repository
igraph/python-igraph
1 merged

Created an issue in theislab/anndata that received 4 comments

read_h5ad and Python 3.9: all strings are now bytes?

Hi all, Thanks for the amazing package! Just updated to Python 3.9 since numba has fixed their side last month. Most adata strings (e.g. var_names, o…

4 comments
8 contributions in private repositories Feb 1 – Feb 24

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