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Pinned

  1. theislab/scanpy

    Single-Cell Analysis in Python. Scales to >1M cells.

    Python 544 210

  2. theislab/anndata

    Annotated data.

    Python 100 50

  3. constclust

    Consistent Clusters for scRNA-seq

    Python 3

  4. anndata-benchmarks

    Benchmarks of AnnData using asv

    Python

  5. sc-interchange

    Better interchange for single cell tools

    7

809 contributions in the last year

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Contribution activity

January 2020

Created a pull request in theislab/anndata that received 1 comment

Fix unnecessary copy in strings_to_categoricals

Part of a fix for theislab/scanpy#1000 Prevents calling strings_to_categoricals from turning an view to actual if no modification would occur. Addi…

+35 −18 • 1 comment

Created an issue in theislab/anndata that received 3 comments

Index names aren't being checked

Right now, we allow anndata objects to be constructed which have index names we can't write to disk. This is currently causing an issue in the tuto…

3 comments

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