Qingpeng "Q.P." Zhang qingpeng

Pinned

1. khmer

   Forked from dib-lab/khmer

   In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

   Python

2. VenmoPlus

   An Insight Data Engineering Project using Spark, Kafka, ElasticSearch, Redis, Flask, AngularJS

   Python 1

3. igs-diversity

   microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data

   Python 2

4. jgi-ViCA

   Classifying virus DNA sequences using large scale machine learning with Apache Spark

   Jupyter Notebook 3

5. 2013-khmer-counting

   Forked from dib-lab/2013-khmer-counting

   Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"

   Jupyter Notebook

6. vica

   Forked from USDA-ARS-GBRU/vica

   Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes

   Python 1