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[WIP] Sinkhorn in log space #290

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Merged
rflamary merged 18 commits into from
Oct 27, 2021
Merged

[WIP] Sinkhorn in log space #290

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140da40
adda sinkhorn log and working sinkhorn2 function
rflamary Oct 25, 2021
ff6e356
more tests pass
rflamary Oct 25, 2021
c460f0e
more tests pass
rflamary Oct 25, 2021
59f2672
it works but not by default yet
rflamary Oct 25, 2021
c2aa9f1
Merge branch 'master' into sinkhorn_log
rflamary Oct 25, 2021
1c105ad
remove warningd
rflamary Oct 25, 2021
31d3666
update circleci doc
rflamary Oct 25, 2021
b88ed39
update circleci doc
rflamary Oct 26, 2021
57cb7a3
new sinkhorn implemeted but not by default
rflamary Oct 26, 2021
4ef9bf3
better
rflamary Oct 26, 2021
f82c501
doctest pass
rflamary Oct 26, 2021
f769851
test doctest
rflamary Oct 26, 2021
b1c266e
new test utils
rflamary Oct 26, 2021
43c92f8
remove pep8 errors
rflamary Oct 26, 2021
d885c5f
remove pep8 errors
rflamary Oct 26, 2021
8870aa4
doc new implementtaion with log
rflamary Oct 26, 2021
372a8b1
test sinkhorn 2
rflamary Oct 26, 2021
a6b297a
doc for log implementation
rflamary Oct 27, 2021
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update circleci doc
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@rflamary
rflamary committed Oct 25, 2021
commit 31d3666ff9338d85a735e6507fecc1815e7b118b
14 changes: 1 addition & 13 deletions .circleci/config.yml
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Expand Up @@ -4,7 +4,7 @@ version: 2
jobs:
build_docs:
docker:
- image: circleci/python:3.7-stretch
- image: cimg/python:3.9
steps:
- checkout
- run:
Expand Down Expand Up @@ -34,18 +34,6 @@ jobs:
- data-cache-0
- pip-cache

- run:
name: Spin up Xvfb
command: |
/sbin/start-stop-daemon --start --quiet --pidfile /tmp/custom_xvfb_99.pid --make-pidfile --background --exec /usr/bin/Xvfb -- :99 -screen 0 1400x900x24 -ac +extension GLX +render -noreset;

# https://github.com/ContinuumIO/anaconda-issues/issues/9190#issuecomment-386508136
# https://github.com/golemfactory/golem/issues/1019
- run:
name: Fix libgcc_s.so.1 pthread_cancel bug
command: |
sudo apt-get install qt5-default

- run:
name: Get Python running
command: |
Expand Down