Skip to content

BiocCodingCollaborations/VeniceHackathon2026

Repository files navigation

Hackathon on spatial omics
and image-derived data

Participants created and worked in four teams comprising:

  • Spatially stratified differential expression analysis
  • segmentation-analysis: Image and segmentation data manipulation and visualization
  • pretrainedmodels: Facilitating use of spatial foundation models for the Bioconductor community
  • interoperability: Enhanced infrastructure and interoperability for spatial data in Bioconductor

Pre-hackathon information

Useful links

Tentative schedule

  • Sun 19
    • 15:00-17:30 Arrival, check-in
    • 17:30-18:00 Introductions
    • 18:00-20:00 Welcome reception with light dinner and drinks
  • Mon 20
    • 09:00-10:30 Introduction to project goals, group formation
    • 10:30-11:00 Coffee break
    • 11:00-12:30 Session A
    • 12:30-14:00 Lunch
    • 14:00-15:30 Session B
    • 15:30-16:00 Afternoon break
    • 16:00-17:30 Group discussion
    • 17:30-19:30 Free time
    • 19:30-21:00 Dinner
  • Tue 21
    • 09:00-09:30 Plenary meeting, set-up goals
    • 09:30-10:30 Session A
    • 10:30-11:00 Coffee break
    • 11:00-12:30 Session B
    • 12:30-14:00 Lunch
    • 14:00-15:30 Session C
    • 15:30-16:00 Afternoon break
    • 16:00-17:30 Group discussion
    • 17:30-19:30 Free time
    • 19:30-21:00 Dinner
  • Wed 22
    • 09:00-09:30 Plenary meeting, set-up goals
    • 09:00-10:30 Session A
    • 10:30-11:00 Coffee break
    • 11:00-12:30 Session B
    • 12:30-14:00 Lunch
    • 14:00-15:30 Closing remarks
    • 15:30-16:00 Afternoon break
    • 16:00-17:30 (Optional) session

About

A general repository for an -omics hackathon being held in Venice!

Resources

Stars

11 stars

Watchers

1 watching

Forks

Releases

No releases published

Packages

 
 
 

Contributors

Languages